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analyzeAlignments
Estimating sequence diversity from sequence alignments
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Collection of alignment statistics. More...
#include <fastaParser.hpp>
Public Attributes | |
| size_t | referenceStart |
| size_t | referenceLength |
| size_t | queryStart |
| size_t | queryLength |
Collection of alignment statistics.
Collects striped Smith-Waterman alignment statistics.
| size_t BayesicSpace::AlignmentStatistics::queryLength |
| size_t BayesicSpace::AlignmentStatistics::queryStart |
| size_t BayesicSpace::AlignmentStatistics::referenceLength |
| size_t BayesicSpace::AlignmentStatistics::referenceStart |